Reply To: error using pre-Reconstruct

To write out 2D results you mean?
The step that takes long is the ea_screenshot function which uses myaa (antialiasing) code to write out high resolution figures. Could in theory bypass that and use a simple saveas() command if the slow speed bugs you too much. Guess it also depends on the atlas. Does 3D visualization work and did you check reconstruction in the intermediate step?

Best, Andy