Hi there,
then easiest is to:
– process these subjects in lead connectome. No new normalization needed but just run “fibertracking” and normalize fibers
– then load the patients up in lead mapper -> select their stimulations as seed and patient specific connectivity in the dMRI source. Then run seed and you’ll get seedmaps from your VTA to other brain regions.
– After that, can use the scripts ea_Amap, ea_Rmap or ea_Cmap (see Horn 2017 AoN for details) to create maps that denote your behavioral changes as a function of connectivity across patients.
Best, Andy
