Thanks for your reply Andy. I’ve looked in the patient folder and cannot find these deformation files. I had used ANTs SyN for the patient to template nonlinear coregistration. The matlab files in the patient folder are:
postop_ct2anat_t1_ants1
anat_t12postop_ct_ants1
ea_coregctmethod_applied
ea_normmethod_applied
ea_reconstruction
ea_ui
ea_stats_backup
ea_stats
ea_stats_group_1
The ea_normmethod_applied file contains only text stating ‘ea_normalize_ants’.
Yes, I’d like to apply the deformation to one of the fiber tracts that I’ve generated and exported as a 3D object using other software. I was able to use SPM to normalize the tract to the MNI/ICBM template and then use add the normalized tract to the 3d scene. However, I’d prefer using the already calculated deformations from lead-DBS.
Thanks for your help.
